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Information
| Unit | INSTITUTE OF NATURAL AND APPLIED SCIENCES |
| BIOTECHNOLOGY (MASTER) (WITH THESIS) (INTERDISCIPLINARY) | |
| Code | BT528 |
| Name | Phylogenetic Analysis |
| Term | 2018-2019 Academic Year |
| Term | Spring |
| Duration (T+A) | 3-2 (T-A) (17 Week) |
| ECTS | 6 ECTS |
| National Credit | 4 National Credit |
| Teaching Language | Türkçe |
| Level | Belirsiz |
| Type | Normal |
| Mode of study | Yüz Yüze Öğretim |
| Catalog Information Coordinator | Prof. Dr. SALİH KAFKAS |
| Course Instructor |
The current term course schedule has not been prepared yet.
|
Course Goal / Objective
Teaching Phylogenetic Analysis
Course Content
Phylogenetic Analysis
Course Precondition
Resources
Notes
Course Learning Outcomes
| Order | Course Learning Outcomes |
|---|---|
| LO01 | learn What is phylogeny |
| LO02 | learn usage of phylogenetic analysis |
| LO03 | learn Why phylogenetic analysis are necessary |
| LO04 | learn Softwares for phylogenetic analysis |
| LO05 | learn selection of softwares for phylogenetic analysis |
| LO06 | learn use of PAUP |
| LO07 | learn NTSYSpc paket programının kullanımı |
| LO09 | learn Use of GenAlex software |
| LO10 | learn Use of Powermarker software |
| LO11 | learn Determination of genetic similarity |
| LO12 | learn drawing phylogenetic tree |
| LO13 | learn options for phylogenetic trees |
| LO14 | learn UPGMA analysis |
| LO15 | learn Evaluation of results |
Relation with Program Learning Outcome
| Order | Type | Program Learning Outcomes | Level |
|---|---|---|---|
| PLO01 | - | Based on the undergraduate level qualifications, develops and deepens the knowledge in the same or different field at the level of expertise and analyzes and interprets them using statistical methods. | |
| PLO02 | - | Gains the ability to develop and deepen the knowledge in the field of biotechnology | |
| PLO03 | - | Identifies the interdisciplinary interaction of the field | |
| PLO04 | - | Interpret the knowledge gained in the field by integrating the information from different disciplines and creates new information | |
| PLO05 | - | Solve problems encountered in the field by using research methods. | |
| PLO06 | - | Develops new strategic approaches for solving complex problems that are encountered in applications related to the field. | |
| PLO07 | - | Solve problems encountered in the field by using research methods. | |
| PLO08 | - | It supervises and teaches the social, scientific, cultural and ethical values during the collection, interpretation, implementation and announcement of the data related to the field. |
Week Plan
| Week | Topic | Preparation | Methods |
|---|---|---|---|
| 1 | What is phylogeny | Text Book | |
| 2 | usage of phylogenetic analysis | Text Book | |
| 3 | Why phylogenetic analysis are necessary | Text Book | |
| 4 | Softwares for phylogenetic analysis | Text Book | |
| 5 | selection of softwares for phylogenetic analysis | Text Book | |
| 6 | use of PAUP | Text Book | |
| 7 | NTSYSpc paket programının kullanımı | Text Book | |
| 8 | Mid-Term Exam | Text Book | |
| 9 | Use of GenAlex software | Text Book | |
| 10 | Use of Powermarker software | Text Book | |
| 11 | Determination of genetic similarity | Text Book | |
| 12 | drawing phylogenetic tree | Text Book | |
| 13 | options for phylogenetic trees | Text Book | |
| 14 | UPGMA analysis | Text Book | |
| 15 | Evaluation of results | Text Book | |
| 16 | Term Exams | Text Book | |
| 17 | Term Exams | Text Book |