TÜRKÇE
ENGLISH
Information
| Code | BK607 |
| Name | Factors and mecanisms for virulence of plant pathogenic bacteria |
| Term | 2024-2025 Academic Year |
| Term | Fall |
| Duration (T+A) | 2-0 (T-A) (17 Week) |
| ECTS | 6 ECTS |
| National Credit | 2 National Credit |
| Teaching Language | Türkçe |
| Level | Doktora Dersi |
| Type | Normal |
| Mode of study | Yüz Yüze Öğretim |
| Catalog Information Coordinator | Prof. Dr. YEŞİM AYSAN |
| Course Instructor |
Prof. Dr. YEŞİM AYSAN
(A Group)
(Ins. in Charge)
|
Course Goal / Objective
The aim of the course is to teach how to plant pathogenic bacteria attack plants
Course Content
The course content is how to plant pathogenic bacteria attack plants
Course Precondition
none
Resources
Nian Wang, Jeffrey B. Jones, George W. Sundin, Frank White, Saskia Hogenhout, Caroline Roper, Leonardo De La Fuente, and Jong Hyun Ham, 2015. Virulence Mechanisms of Plant-Pathogenic Bacteria. APS Press, 492 pages, ISBN: 978-0-89054-444-0
Notes
Z. Klement, K. Rudolph,D.C. Sands, 1990. Methods in Phytobacteriology. Akademial Kiodo, Budapest. 567p. Lelliott, R. A., and D. E. Stead, 1987. Methods for the Diagnosis of Bacterial Diseases of Plants. Methods in Plant Pathology Volume 2 (Series editor T. F. Preece), Published on behalf of the British Society for Plant Pathology by Blackwell Scientific Publications, Oxford, UK., 219 pages.
Course Learning Outcomes
| Order | Course Learning Outcomes |
|---|---|
| LO01 | Students will learn about how bacteria enter to plant tissue |
| LO02 | Students will learn about how bacteria communicate with each other |
| LO03 | Students will learn about quorum sensing mechanisms in bacterial comminity |
| LO04 | Students will learn about taxis, curli, and signal moleculs in bacterial comminity |
| LO05 | Students will learn about bacterial biofilms |
| LO06 | Students will learn about secretion systems in bacteria |
| LO07 | Students will learn about bacterial toxins in necrotic diseases |
| LO08 | Students will learn about bacterial toxins in wilt diseases |
| LO09 | Students will learn about bacteria associated polysaccharides (LPS and EPS) |
| LO10 | Students will learn about bacteria associated enzymes |
| LO11 | Students will learn about plant hormones in plant bacterial diseases. |
| LO12 | Students will learn about virulence factors of fire bligt pathogen, Erwinia amylovora |
| LO13 | Students will learn about virulence factors of soft rot disease agent, Pectobacterium and Dickeya genus |
| LO14 | Students will learn about virulence factors of gall disease agent, Agrobacterium tumefaciens |
| LO15 | Students will learn about how to plant pathogenic bacteria attack plants and induce disease symptoms |
Relation with Program Learning Outcome
| Order | Type | Program Learning Outcomes | Level |
|---|---|---|---|
| PLO01 | Bilgi - Kuramsal, Olgusal | Has knowledge on basic topics about general science, general agricultural engineering and plant production | |
| PLO02 | Bilgi - Kuramsal, Olgusal | Knows the biology, ecology, systematics and control strategies of diseases, pests and weeds causing yield losses in plants | 3 |
| PLO03 | Bilgi - Kuramsal, Olgusal | Knows the identification and the biology of the diseases and how to control diseases,pests and weeds causing yield losses in plants in practice. | 2 |
| PLO04 | Bilgi - Kuramsal, Olgusal | Comprehends the plant protection problems, gains the ability to solve the problems via scientific methods | |
| PLO05 | Beceriler - Bilişsel, Uygulamalı | Obtains the skill to use a laboratory, analyzes and evaluates the results and prepares reports. | 3 |
| PLO06 | Bilgi - Kuramsal, Olgusal | Decides to the most useful control strategy to cope with the plant protection problems and gets them to be used correctly. | 4 |
| PLO07 | Bilgi - Kuramsal, Olgusal | Has necessary knowledge to use the essential technologies, synthesizes them to prepare oral presentations. | 2 |
| PLO08 | Yetkinlikler - Alana Özgü Yetkinlik | Gains the ability to identify problems related to the field and to construct and use high-level scientific research methods in solving them. | |
| PLO09 | Yetkinlikler - Alana Özgü Yetkinlik | Being able to independently carry out a work or project that requires expertise in the field, develop new approaches for solving problems encountered in practice and produce solutions by taking responsibility. | |
| PLO10 | Yetkinlikler - Alana Özgü Yetkinlik | Gains the ability to identify problems related to the field and to construct and use high-level scientific research methods in solving them | |
| PLO11 | Yetkinlikler - Alana Özgü Yetkinlik | Can develop and deepen the knowledge in plant protection in general, in field of expertise in particular, gain the ability to carry out and have studies that will bring innovation to science and reach original results. | |
| PLO12 | Yetkinlikler - İletişim ve Sosyal Yetkinlik | He/she can defend his/her original inventions, opinions, approaches and suggestions in front of experts and discuss them by communicating effectively. | |
| PLO13 | Yetkinlikler - Bağımsız Çalışabilme ve Sorumluluk Alabilme Yetkinliği | Can associate Plant protection-related subjects with other fields of science, and effectively use the knowledge that requires expertise in the evaluation of new and complex ideas, events, and phenomena. | |
| PLO14 | Yetkinlikler - Bağımsız Çalışabilme ve Sorumluluk Alabilme Yetkinliği | Scientific, technological, social and cultural advances in plant protection; can take active roles in creating an information society, solving problems with scientific methods and making decisions. | |
| PLO15 | Beceriler - Bilişsel, Uygulamalı | Can use the knowledge and experience in the field of Plant Protection to solve the problems encountered in the field of production, takes part in public and private organizations or provides consultancy services. | |
| PLO16 | Yetkinlikler - Alana Özgü Yetkinlik | Gains the ability to transform the results of research and projects into reports/thesis and to present and publish them in international meetings and journals. |
Week Plan
| Week | Topic | Preparation | Methods |
|---|---|---|---|
| 1 | Discus on how bacteria enter to plant tissue | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 2 | Discus on how bacteria communicate with each other | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 3 | Discus on quorum sensing mechanisms in bacterial comminity | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 4 | Taxis, curli, and signal moleculs in bacterial comminity | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 5 | The importance of biofilm formation in bacteria | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 6 | Secretion systems (Tip I-X) in bacteria | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 7 | Bacterial toxins in necrotic diseases | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 8 | Mid-Term Exam | preparing the exam | Ölçme Yöntemleri: Sözlü Sınav |
| 9 | Bacterial toxins in wilt diseases | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 10 | Bacteria associated polysaccharides (LPS and EPS) and related diseases | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 11 | Bacteria associated enzaymes and soft rot diseases | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 12 | Plant hormones in plant bacterial diseases | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 13 | virulence factors of fire bligt pathogen, Erwinia amylovora | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 14 | virulence factors of soft rot disease agent, Pectobacterium and Dickeya genus | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 15 | Virulence factors of gall disease agent, Agrobacterium tumefaciens | Reading the related lecture notes | Öğretim Yöntemleri: Anlatım |
| 16 | Term Exams | preparing the exam | Ölçme Yöntemleri: Sözlü Sınav |
| 17 | Term Exams | preparing the exam | Ölçme Yöntemleri: Yazılı Sınav |
Student Workload - ECTS
| Works | Number | Time (Hour) | Workload (Hour) |
|---|---|---|---|
| Course Related Works | |||
| Class Time (Exam weeks are excluded) | 14 | 2 | 28 |
| Out of Class Study (Preliminary Work, Practice) | 14 | 6 | 84 |
| Assesment Related Works | |||
| Homeworks, Projects, Others | 2 | 6 | 12 |
| Mid-term Exams (Written, Oral, etc.) | 1 | 6 | 6 |
| Final Exam | 1 | 12 | 12 |
| Total Workload (Hour) | 142 | ||
| Total Workload / 25 (h) | 5,68 | ||
| ECTS | 6 ECTS | ||