TÜRKÇE
ENGLISH
Information
| Code | BK529 |
| Name | The Molecular Studies in Phytopathology |
| Term | 2024-2025 Academic Year |
| Term | Fall |
| Duration (T+A) | 3-0 (T-A) (17 Week) |
| ECTS | 6 ECTS |
| National Credit | 3 National Credit |
| Teaching Language | Türkçe |
| Level | Doktora Dersi |
| Type | Normal |
| Mode of study | Yüz Yüze Öğretim |
| Catalog Information Coordinator | Prof. Dr. SAADETTİN BALOĞLU |
| Course Instructor |
Dr. Öğr. Üyesi GÖKMEN KOÇ
(A Group)
(Ins. in Charge)
Doç. Dr. MUHARREM ARAP KAMBEROĞLU (A Group) (Asst. Ins.) |
Course Goal / Objective
To control plant pathogen, ıt has to be identifiy. As molecular methods are more sensitive than methods, to identifiy and characterize pathogen clearly, molecular methods are teached to students.
Course Content
Identification of patogen which causes disease on plants, by molecular methods, application of molecular methods in laboratory
Course Precondition
NO
Resources
Power point presentations and Lecture notes
Notes
Literatures
Course Learning Outcomes
| Order | Course Learning Outcomes |
|---|---|
| LO01 | skilful aboutbBase science, general agricultural engineering and laboratory diccipline |
| LO02 | Skilful about the aim for identification of plant pathogen. Skilful about steps fallowing ways for identification of pathogens |
| LO03 | Skilful about sensitivity of molecular methods more than other techniques. Learn about molecular techniques are based on pathogen genes |
| LO04 | Skilful about dsRNA analysis |
| LO05 | Skilful about ploymerase chan reaction (PCR) and about compounts of ploymerase chan reaction (PCR) Learn about application of ploymerase chan reaction (PCR) |
| LO06 | Skilful about observation of product of molecular tests |
| LO07 | Skilful about DNA sequencing of receiving material from molecular techniques |
| LO08 | Learn about filogenetic releationship between other pathogen and Genebank |
| LO09 | Skilful about which techniques have to be applied for pathogen |
Relation with Program Learning Outcome
| Order | Type | Program Learning Outcomes | Level |
|---|---|---|---|
| PLO01 | Bilgi - Kuramsal, Olgusal | Has knowledge on basic topics about general science, general agricultural engineering and plant production | 4 |
| PLO02 | Bilgi - Kuramsal, Olgusal | Knows the biology, ecology, systematics and control strategies of diseases, pests and weeds causing yield losses in plants | 5 |
| PLO03 | Bilgi - Kuramsal, Olgusal | Knows the identification and the biology of the diseases and how to control diseases,pests and weeds causing yield losses in plants in practice. | 4 |
| PLO04 | Bilgi - Kuramsal, Olgusal | Comprehends the plant protection problems, gains the ability to solve the problems via scientific methods | 5 |
| PLO05 | Beceriler - Bilişsel, Uygulamalı | Obtains the skill to use a laboratory, analyzes and evaluates the results and prepares reports. | 4 |
| PLO06 | Bilgi - Kuramsal, Olgusal | Decides to the most useful control strategy to cope with the plant protection problems and gets them to be used correctly. | 5 |
| PLO07 | Bilgi - Kuramsal, Olgusal | Has necessary knowledge to use the essential technologies, synthesizes them to prepare oral presentations. | 4 |
| PLO08 | Yetkinlikler - Alana Özgü Yetkinlik | Gains the ability to identify problems related to the field and to construct and use high-level scientific research methods in solving them. | |
| PLO09 | Yetkinlikler - Alana Özgü Yetkinlik | Being able to independently carry out a work or project that requires expertise in the field, develop new approaches for solving problems encountered in practice and produce solutions by taking responsibility. | |
| PLO10 | Yetkinlikler - Alana Özgü Yetkinlik | Gains the ability to identify problems related to the field and to construct and use high-level scientific research methods in solving them | |
| PLO11 | Yetkinlikler - Alana Özgü Yetkinlik | Can develop and deepen the knowledge in plant protection in general, in field of expertise in particular, gain the ability to carry out and have studies that will bring innovation to science and reach original results. | |
| PLO12 | Yetkinlikler - İletişim ve Sosyal Yetkinlik | He/she can defend his/her original inventions, opinions, approaches and suggestions in front of experts and discuss them by communicating effectively. | |
| PLO13 | Yetkinlikler - Bağımsız Çalışabilme ve Sorumluluk Alabilme Yetkinliği | Can associate Plant protection-related subjects with other fields of science, and effectively use the knowledge that requires expertise in the evaluation of new and complex ideas, events, and phenomena. | |
| PLO14 | Yetkinlikler - Bağımsız Çalışabilme ve Sorumluluk Alabilme Yetkinliği | Scientific, technological, social and cultural advances in plant protection; can take active roles in creating an information society, solving problems with scientific methods and making decisions. | |
| PLO15 | Beceriler - Bilişsel, Uygulamalı | Can use the knowledge and experience in the field of Plant Protection to solve the problems encountered in the field of production, takes part in public and private organizations or provides consultancy services. | |
| PLO16 | Yetkinlikler - Alana Özgü Yetkinlik | Gains the ability to transform the results of research and projects into reports/thesis and to present and publish them in international meetings and journals. |
Week Plan
| Week | Topic | Preparation | Methods |
|---|---|---|---|
| 1 | The aim of identification of plant pathogens | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Gösteri |
| 2 | Diferences and sensitivity of molecular techniques than other methods | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Gösteri |
| 3 | Features, application ways and aim of compounts uesed in moleculat tests | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Gösteri |
| 4 | Nucleic acide isolation from infected plants | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Deney / Laboratuvar |
| 5 | Primers design used on identification of pathogen | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Gösteri |
| 6 | Areas uf usege of polymerase chain reaction (PCR) | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Gösteri |
| 7 | Application of polymerase chain reaction (PCR) | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Deney / Laboratuvar |
| 8 | Mid-Term Exam | Writting - Oral | Ölçme Yöntemleri: Yazılı Sınav, Sözlü Sınav |
| 9 | Observation of polymerase chain reaction (PCR) products | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Deney / Laboratuvar |
| 10 | Assessment of polymerase chain reaction (PCR) products | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Gösteri |
| 11 | DNA sequencing of of polymerase chain reaction (PCR) products | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Gösteri |
| 12 | Construction of filogenetic tree from of polymerase chain reaction (PCR) products | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Tartışma, Gösteri |
| 13 | Cloning | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Gösteri, Deney / Laboratuvar |
| 14 | Double stranded RNA analysis method | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Deney / Laboratuvar |
| 15 | Electroforesis methods | lecture notes and suplmentary textbook | Öğretim Yöntemleri: Anlatım, Deney / Laboratuvar |
| 16 | Term Exams | Writting - Oral | Ölçme Yöntemleri: Yazılı Sınav, Sözlü Sınav |
| 17 | Term Exams | Writting - Oral | Ölçme Yöntemleri: Yazılı Sınav, Sözlü Sınav |
Student Workload - ECTS
| Works | Number | Time (Hour) | Workload (Hour) |
|---|---|---|---|
| Course Related Works | |||
| Class Time (Exam weeks are excluded) | 14 | 3 | 42 |
| Out of Class Study (Preliminary Work, Practice) | 14 | 5 | 70 |
| Assesment Related Works | |||
| Homeworks, Projects, Others | 0 | 0 | 0 |
| Mid-term Exams (Written, Oral, etc.) | 1 | 15 | 15 |
| Final Exam | 1 | 30 | 30 |
| Total Workload (Hour) | 157 | ||
| Total Workload / 25 (h) | 6,28 | ||
| ECTS | 6 ECTS | ||